Config.hpp

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#ifndef CONFIG_HPP
#define CONFIG_HPP
 
#include <fstream>
#include <sstream>
#include <string>
#include <vector>
#include <stdexcept>
#include <iostream>
 
class Config {
public:
    int LENGTH_BOX; // Length of the box 
    int SAFETY_DISTANCE; // Safety distance between the border of the box and the cells created
    int NUMBER_OF_MCS; // Number of Monte Carlo Steps
    int NUMBER_OF_STEPS;  // Number of steps to do during simulation : calculated in constructor
    int NUMBER_OF_SAVINGS; // Number of savings
    std::vector<float> NB_CELLS; // Number of cells 
    std::vector<float> TARGET_SURFACE_CELL; // Target surface of the cells
    std::vector<float> TARGET_LENGTH_CELL; // Target length of the cells
    float KT; // Temperature
    std::vector<std::vector<float>> J; // Interaction matrix
    std::vector<float> LAMBDA_SURFACE; // Lambda surface
    std::vector<float> LAMBDA_LENGTH;// Lambda length
    std::vector<float> LAMBDA_CHEMOTAXIS; // Lambda chemotaxis
    int WINDOW_SIZE; // Window size
 
    float DT; // Time step
    float DX;// X step
    float D; // Diffusion coefficient
    float BOUNDARY_CONDITION; // Boundary condition
    float ETA0;// Eta0
    float GAMMA0; // Gamma0
 
    std::vector<bool> HAMILTONIAN; // Hamiltonian : booleans for each part of the hamiltonian (interation, surface, length, chemotaxis, connectivity)
 
    Config(const std::string& file_path);
 
    void loadConfig(const std::string& file_path);
 
    void printConfig();
 
private:
    void parseKeyValue(const std::string& key, const std::string& value);
 
    std::vector<std::vector<float>> parse2DArray(const std::string& value);
 
    std::vector<float> parse1DArray(const std::string& value);
 
    std::vector<bool> parseBoolArray(const std::string& value);
 
    void trim(std::string& str);
};
 
#endif // CONFIG_HPP